FASTR¶
FASTR is a framework that helps creating workflows of different tools. The workflows created in FASTR are automatically enhanced with flexible data input/output, execution options (local, cluster, etc) and solid provenance.
We chose to create tools by creating wrappers around executables and connecting everything with Python.
Fastr is open-source (licensed under the Apache 2.0 license) and hosted on bitbucket at https://bitbucket.org/bigr_erasmusmc/fastr
For support, go to https://groups.google.com/d/forum/fastr-users
To get yourself a copy, see the Installation
The official documentation can be found at fastr.readthedocs.io
The Fastr workflow system is presented in the following article:
Fastr is made possible by contributions from the following people: Hakim Achterberg, Marcel Koek, Adriaan Versteeg, Thomas Phil, Mattias Hansson, Baldur van Lew, Marcel Zwiers, and Coert Metz
FASTR Documentation¶
- Introduction
- Quick start guide
- User Manual
- Command Line Tools
- Resource File Formats
- Resource Reference
- Development and Design Documentation
- Changelog