# Copyright 2011-2014 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import os
import fastr
from fastr.helpers.report import print_job_result
from fastr.utils.cmd import add_parser_doc_link
from fastr.execution.job import Job
FASTR_LOG_TYPE = 'none' # Do not get info about fastr
[docs]def get_parser():
parser = argparse.ArgumentParser(
description="Print a report of a job result file."
)
parser.add_argument('job', metavar='JOBFILE', nargs='?', type=str,
help=f'File of the job to execute (default ./{Job.RESULT_DUMP})')
parser.add_argument('-v', '--verbose', action='store_true', help="More verbose (e.g. add fastr job stdout and stderr)")
return parser
[docs]def main():
"""
Print report of a job result (__fastr_result__.pickle.gz) file
"""
# No arguments were parsed yet, parse them now
parser = add_parser_doc_link(get_parser(), __file__)
args = parser.parse_args()
job = args.job
if job is None:
curdir_contents = os.listdir('.')
if Job.RESULT_DUMP in curdir_contents:
job = Job.RESULT_DUMP
else:
fastr.log.critical(f'No job given and cannot find {Job.RESULT_DUMP} in current directory!')
exit()
print_job_result(job, verbose=args.verbose)
if __name__ == '__main__':
main()