Source code for fastr.utils.cmd.verify

#!/usr/bin/env python

# Copyright 2011-2014 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import argparse
FASTR_LOG_TYPE = 'none'  # Do not get info about fastr


[docs]def get_parser(): parser = argparse.ArgumentParser() parser.add_argument('resource_type', metavar='TYPE', choices=['tool'], help='Type of resource to verify (e.g. tool)') parser.add_argument('path', help='path of the resource to verify') return parser
[docs]def main(args=None, unknown_args=None): """ Print information from a job file """ if args is None and unknown_args is None: # No arguments were parsed yet, parse them now parser = get_parser() args, unknown_args = parser.parse_known_args() import fastr from fastr.utils.verify import verify_tool resource_type = args.resource_type.lower() if resource_type == 'tool': verify_tool(args.path) else: fastr.log.error('Unknown resource type {}'.format(resource_type))