#!/usr/bin/env python
# Copyright 2011-2014 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
[docs]def get_parser():
parser = argparse.ArgumentParser(description="Run the tests for a Tool to check the function")
parser.add_argument('tool', metavar='TOOL', help='the id of the tool to test')
return parser
[docs]def main(args=None, unknown_args=None):
"""
Run the tests of a tool to verify the proper function
"""
if args is None and unknown_args is None:
# No arguments were parsed yet, parse them now
parser = get_parser()
args, unknown_args = parser.parse_known_args()
import fastr
tool = fastr.toollist[args.tool]
try:
tool.test()
except fastr.exceptions.FastrValueError as e:
fastr.log.error('Tool is not valid: {}'.format(e))
if __name__ == '__main__':
main()