#!/usr/bin/env python
# Copyright 2011-2014 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
from fastr.utils.cmd import add_parser_doc_link
FASTR_LOG_TYPE = 'none' # Do not get info about fastr
[docs]def get_parser():
parser = argparse.ArgumentParser(
description="Verify fastr resources, at the moment only tool definitions"
"are supported."
)
parser.add_argument('resource_type', metavar='TYPE', choices=['tool'],
help='Type of resource to verify (e.g. tool)')
parser.add_argument('path', help='path of the resource to verify')
return parser
[docs]def main():
"""
Print information from a job file
"""
# No arguments were parsed yet, parse them now
parser = add_parser_doc_link(get_parser(), __file__)
args = parser.parse_args()
import fastr
from fastr.utils.verify import verify_tool
resource_type = args.resource_type.lower()
if resource_type == 'tool':
verify_tool(args.path)
else:
fastr.log.error('Unknown resource type {}'.format(resource_type))